Publications
2025
- Akiko Ueno, Fumiko Takida, Tomoki Kita, Takuro Ishii, Tomoki Himiyama, Takuya Mabuchi & Yasunori Okamoto
A cytokine-based designer enzyme with an abiological multinuclear metal center exhibits intrinsic and extrinsic catalysis
Nature Communications 16, 6781; doi: 10.1038/s41467-025-61909-5 (2025)
- T. Ehara, Y. Yoneda, T. Yoshida, T. Ogawa, Y. Konishi, T. Ono, A. Muranaka, H. Kuramochi, K. Miyata, and K. Onda
Dynamic Excited-State Localization Induced by Jahn?Teller Distortion Observed by Coherent Vibrational Spectroscopy
J. Am. Chem. Soc. 147, 26446-26455 (2025).
- Mukaiyama A, Furuike Y, Ito-Miwa K., Onoue Y, Horiuchi K, Kondo K, Yamashita E, Akiyama S
Evolutionary Origins of Self-sustained Kai Protein Circadian Oscillators in Cyanobacteria
Nature Communications 16 4541; doi: 10.1038/s41467-025-59908-7 (2025)
- Takahiro Kosugi, Mikio Tanabe, Nobuyasu Koga
De novo design of ATPase based on a blueprint optimized for harboring the P-loop motif
Protein Science 34, e70132; https://doi.org/10.1002/pro.70132 (2025).
- Furuike Y, Onoue Y, Saito S, Mori T, Akiyama S
The priming phosphorylation of KaiC is activated by the release of its autokinase autoinhibition
PNAS Nexus 4 pgaf136; doi: 10.1093/pnasnexus/pgaf136 (2025)
- T. Sato, H. Goto, H. M. Yamamoto,
Sturdy spin-momentum locking in a chiral organic superconductor
Phys. Rev. Research, 7, 023056 (2025).
- H. M. Yamamoto,
Rolling carbon on a rock
Nat. Mater., 24, 330-331 (2025).
- Y. Yoneda, T. Konishi, K. Suga, S. Saito, and H. Kuramochi
Excited-State Aromatization Drives Nonequilibrium Planarization Dynamics
J. Am. Chem. Soc. 147, 12051-12060 (2025).
- Akiko Ueno, Fumiko Takida, Tomoki Kita, Takuro Ishii, Tomoki Himiyama, Takuya Mabuchi & Yasunori Okamoto
2024
- H. Watanabe, M. Iwamura, K. Nozaki, T. Takanashi, H. Kuramochi, and T. Tahara
Torsional Structural Relaxation Caused by Pt?Pt Bond Formation in the Photoexcited Dimer of Pt(II) N ? C ? N Complex in Solution
J. Phys. Chem. Lett., 16, 1, 406-414 (2025).
- K. Suga, K. Ochiai, Y. Yoneda, H. Kuramochi, and S. Saito
An Energy-Tunable Dual Emission Mechanism of the Hybridized Local and Charge Transfer (HLCT) and the Excited State Conjugation Enhancement (ESCE)
Chem. Eur. J. e202404376 (2024).
- P. V. Mollers, A. J. Urban, S. D. Feyter, H. M. Yamamoto, H. Zacharias
Probing the Roles of Temperature and Cooperative Effects in Chirality-Induced Spin Selectivity: Photoelectron Spin Polarization in Helical Tetrapyrroles
J. Phys. Chem. Lett., 15, 9620-9629 (2024).
- S. Yasuzuka, S. Uji, T. Terashima, T. Konoike, D. Graf, E. S. Choi, J. S. Brooks, H. M. Yamamoto, R. Kato
Interplay between Angular-Dependent Magnetoresistance Oscillation and Charge-Ordered States in the Organic Conductor β′′-(ET)(TCNQ)
J. Phys. Soc. Jpn., 93, 094708 (2024).
- Y. Yoneda and H. Kuramochi
Room-Temperature Solution Fluorescence Excitation Correlation Spectroscopy
J. Phys. Chem. Lett. 15, 8533-8539 (2024).
- Inobe T, Sakaguchi R, Obita T, Mukaiyama A, Koike S, Yokoyama T, Mizuguchi M, Akiyama S
Structural insights into rapamycin-induced oligomerization of a FRB?FKBP fusion protein
- Akiyama S, Furuike Y
Autonomous Disassembly of circadian clock system of cyanobacteria at dawn
Circadian Clocks in 2024, 89-97 (2025)
- H. Kusunose, J. Kishine, H. M. Yamamoto
Emergence of chirality from electron spins, physical fields, and material-field composites
Appl. Phys. Lett., 124, 260501 (2024).
- A. Inda, R. Oiwa, S. Hayami, H. M. Yamamoto, H. Kusunose
Quantification of chirality based on electric toroidal monopole
J. Chem. Phys., 160, 184117 (2024).
- H. Kuramochi, T. Tsutsumi, K. Saita, Z. Wei, M. Osawa, P. Kumar, L. Liu, S. Takeuchi, T. Taketsugu, and T. Tahara
Ultrafast Raman Observation of the Perpendicular Intermediate Phantom State of Stilbene Photoisomerization
Nat. Chem. 16, 22-27 (2024).
- Koya Sakuma, Naohiro Kobayashi, Toshihiko Sugiki, Toshio Nagashima,Toshimichi Fujiwara, Kano Suzuki, Naoya Kobayashi, Takeshi Murata, Takahiro Kosugi, Rie Tatsumi-Koga, and Nobuyasu Koga
Design of complicated all-α protein structures
Nature Structural and Molecular Biology; doi.org/10.1038/s41594-023-01147-9 (2024).
- H. Watanabe, M. Iwamura, K. Nozaki, T. Takanashi, H. Kuramochi, and T. Tahara
2023
- Furuike Y, Yamashita E, Akiyama S
Structure-function relationship of KaiC around dawn
Biophysics and Physicobiology; doi: 10.2142/biophysico.bppb-v21.0001 (2023)
- Y. Oshima, T. Takenobu, J. Pu, K. Ishiguro, R. Kato, H. M. Yamamoto, T. Kusamoto
A Memristive Oscillator
Adv. Phys. Res., 3, 2300117 (2024).
- R. Kimura, Y. Yoneda, H. Kuramochi, and S. Saito
Environment-Sensitive Fluorescence of COT-Fused Perylene Bisimide Based on Symmetry-Breaking Charge Separation
Photochemical & Photobiological Sciences 22, 2541-2522; doi.org/10.1007/s43630-023-00468-4 (2023).
- H. Aizawa, T. Sato, S. Maki-Yonekura, K. Yonekura, K. Takaba, T. Hamaguchi, T. Minato, H. M. Yamamoto
Enantioselectivity of discretized helical supramolecule consisting of achiral cobalt phthalocyanines via chiral-induced spin selectivity effect
Nature Communications 14, 4530; doi.org/10.1038/s41467-023-40133-z (2023).
- S. Minami, N. Kobayashi, T. Sugiki, T. Nagashima, T. Fujiwara, R. Tatsumi-Koga, G. Chikenji, N. Koga
Exploration of novel αβ-protein folds through de novo design
Nature Structural & Molecular Biology 30, 1132-1140; doi.org/10.1038/s41594-023-01029-0 (2023).
- T. Kosugi, T. Iida, M. Tanabe, R. Iino, N Koga.
Design of allosteric sites into rotary motor V1-ATPase by restoring lost function of pseudo-active sites
Nature Chemistry, 15, 1591-1598; doi.org/10.1038/s41557-023-01256-4 (2023).
- Y. Yoneda and H. Kuramochi
Rapid-Scan Resonant Two-Dimensional Impulsive Stimulated Raman Spectroscopy of Excited States
The Journal of Physical Chemistry A 127, 24, 5276-5286; doi.org/10.1021/acs.jpca.3c02489 (2023)
- A. J. Urban, H. M. Yamamoto
Strong and Tunable Near-Infrared Circular Dichroism in Helical Tetrapyrrole Complexes
Chemistry A EuropeanJournal 29, e20230094; doi.org/10.1002/chem.202300940 (2023).
- D. Yoshioka, Y. Yoneda, I. Y. Chang, H. Kuramochi, K. Hyeon-Deuk, and Y. Kobayashi
Quasi-Reversible Photoinduced Displacement of Aromatic Ligands from Semiconductor Nanocrystals
ACS Nano 17, 12, 11309-11317; doi.org/10.1021/acsnano.2c12578 （2023）.
- R. Malatong, T. Sato, J. Kumsampao, T. Minato, M. Suda, V. Promarak, H. M. Yamamoto,
Highly Durable Spin Filter Switching Based on Self-Assembled Chiral Molecular Motor
Small 19, 32, 2302714; doi.org/10.1002/smll.202302714 (2023).
- Y. Kawasugi, H. Suzuki, H. M. Yamamoto, R. Kato, N. Tajima,
Strain-induced massless Dirac fermion state of the molecular conductor α-(BEDT-TTF)2I3
Applied Physics Letters 122, 12, 123102; doi.org/10.1063/5.0141023 (2023).
- R. Nakajima, D. Hirobe, G. Kawaguchi, Y. Nabei, T. Sato, T. Narushima, H. Okamoto, H. M. Yamamoto
Giant spin polarization and a pair of antiparallel spins in a chiral superconductor
Nature 613, 479-484 ; doi:10.1038/s41586-022-05589-x (2023)
- Furuike Y, Yamashita E, Akiyama S
2022
- D. Hirobe, Y. Nabei, H. M. Yamamoto,
Chirality-induced intrinsic charge rectification in a tellurium-based field-effect transistor
Physical Review B 106, 22, L220403; doi.org/10.1103/PhysRevB.106.L220403 (2022).
- J. Kishine, H. Kusunose, H. M. Yamamoto,
On the Definitionof Chirality and Enantioselective Fields
Israel Journal of Chemistry 62, 11-12, e2022000; doi.org/10.1002/ijch.202200049 (2022).
- Akihiro Otomo, Takahiro Kosugi
Tackle "Molecular Engine" by early-career researchers
Biophysics and Physicobiology 19, e190039; doi.org/10.2142/biophysico.bppb-v19.0039 (2022).
- Makito Miyazaki, Takahiro Kosugi
Uncovering the design principles of supramolecular assemblies through manipulation of the structures, dynamics, and functions
Biophysics and Physicobiology 19, e190031; doi.org/10.2142/biophysico.bppb-v19.0031 (2022).
- Mukaiyama A, Furuike Y, Yamashita E, Akiyama S
Highly sensitive tryptophan fluorescence probe for detecting rhythmic conformational changes of KaiC in the cyanobacterial circadian clock system
Biochemical Journal 479, 14, 1505-1515; doi: 10.1042/BCJ20210544 (2022).
- Furuike Y, Mukaiyama A, Koda S, Simon D, Ouyang D, Ito-Miwa K, Saito S, Yamashita E, Nishiwaki-Ohkawa T, Terauchi K, Kondo T, Akiyama S
Regulation Mechanisms of the Dual ATPase in KaiC
Proceedings of the National Academy of Sciences of the United States of America 119, e2119627119; doi: 10.1073/pnas.2119627119 (2022)
- K. Hashimoto, R. Kobayashi, S. Ohkura, S. Sasaki, N. Yoneyama,
M. Suda, H. M. Yamamoto, Takahiko Sasaki,
Optical Conductivity Spectra of Charge-Crystal and Charge-Glass States in a Series of θ-Type BEDT-TTF Compounds
Crystals 12, 6, 831; doi.org/10.3390/cryst12060831 (2022).
- Furuike Y, Mukaiyama A, Ouyang D, Ito-Miwa K, Simon D, Yamashita E, Kondo T, Akiyama S
Elucidation of Master Allostery Essential for Circadian Clock Oscillation in Cyanobacteria
Science Advances 8, eabm8990; doi: 10.1126/sciadv.abm8990 (2022)
- Furuike Y, Ouyang D, Tominaga T, Matsuo T, Mukaiyama A, Kawakita Y, Fujiwara S, Akiyama S
Cross-scale Analysis of Temperature Compensation in the Cyanobacterial Circadian Clock System
Communications Physics 5, 75; doi: 10.1038/s42005-022-00852-z (2022)
- A. Kato, H. M. Yamamoto, J. Kishine,
Chirality-induced spin filtering in pseudo Jahn-Teller molecules
Physical Review 105, 19, 195117; doi.org/10.1103/PhysRevB.105.195117 (2022).
- T. Thomas, T. Thyzel, H. Sun, J. Müller, K. Hashimoto, T. Sasaki, H. M. Yamamoto,
Comparison of the charge-crystal and charge-glass state in geometrically frustrated organic conductors studied by fluctuation spectroscopy
Physical Review 105, 20, 205111; doi.org/10.1103/PhysRevB.105.205111 (2022).
- Simon D, Mukaiyama A, Furuike Y, Akiyama S
Slow and Temperature-compensated Autonomous Disassembly of KaiB-KaiC Complex
Biophysics and Physicobiology 19, e190008; doi: 10.2142/biophysico.bppb-v19.0008 (2022)
- Maruyama M, Furukawa Y, Kinoshita M, Mukaiyama A, Akiyama S, Yoshimura T
Adenylate kinase 1 overexpression increases locomotor activity in medaka fish
PLoS ONE 17, e0257967; doi: 10.1371/journal.pone.0257967 (2022)
- D. Hirobe, Y. Nabei, H. M. Yamamoto,
2021
- Y. Kawasugi, H. M. Yamamoto,
Simultaneous Control of Bandfilling and Bandwidth in Electric Double-Layer Transistor Based on Organic Mott Insulator κ-(BEDT-TTF)2Cu[N(CN)2]Cl
Crystals 12, 1, 42; doi.org/10.3390/cryst12010042 (2022).
- M. Mitsumoto, K. Sugaya, K. Kazama, R. Nakano, T. Kosugi, T. Murata, N. Koga,
State-Targeting Stabilization of Adenosine A2A Receptor by Fusing a Custom-Made De Novo Designed α-Helical Protein
International Journal of Molecular Sciences 22, 23, 12906 (13 pages) ; doi.org/10.3390/ijms222312906 (2021).
- D. Sakamaki, S. Tanaka, K. Tanaka, M. Takino, M. Gon, K. Tanaka, T. Hirose, D. Hirobe, H. M. Yamamoto, H. Fujiwara,
Double Heterohelicenes Composed of Benzo[b]- and Dibenzo[b,i]phenoxazine: A Comprehensive Comparison of Their Electronic and Chiroptical Properties
The Journal of Physical Chemistry Letters 12, 38, 9283-9292; doi.org/10.1021/acs.jpclett.1c02896 (2021).
- Akiyama S, Kamikubo H
Beyond multi-disciplinary and cross-scale analyses of the cyanobacterial circadian clock system
Biophysics and Physicobiology, doi.org/10.2142/biophysico.bppb-v18.031 (2021)
- H. Murata, H. Imakawa, N. Koga, G. Chikenji
The register shift rules for βαβ-motifs for de novo protein design
PLoS ONE 16, 8, e0256895 (24 pages); doi.org/10.1371/journal.pone.0256895 (2021).
- H. M. Yamamoto,
Phase-Transition Devices Based on Organic Mott Insulators
Bulletin of the Chemical Society of Japan 94, 10, 2505-2539; doi.org/10.1246/bcsj.20210256 (2021).
- Akiyama S
Reasons for Seeking Information on the Molecular Structure and Dynamics of Circadian Clock Components in Cyanobacteria
Circadian Rhythms in Bacteria and Microbiomes, 138-145 (2021)
- Y. Kawasugi, H. Masuda, J. Pu, T. Takenobu, H. M. Yamamoto,
R. Kato, N. Tajima,
Electric Double Layer Doping of Charge-Ordered Insulators α-(BEDT-TTF)2I3 and α-(BETS)2I3
Crystals 11, 7, 791; doi.org/10.3390/cryst11070791 (2021).
- Okumura M, Kanemura S, Matsusaki M, Lee YH, Akiyama S, Inaba K
A unique leucine-valine adhesive motif supports structure and function of protein disulfide isomerase P5 via dimerization
Structure 29, 1-14; doi.org/10.1016/j.str.2021.03.016 (2021)
- A. Nakamura, N. Kobayashi, N. Koga, R. Iino,
Positive Charge Introduction on the Surface of Thermostabilized PET Hydrolase Facilitates PET Binding and Degradation
ACS Catalysis 11, 14, 8550-8564; doi.org/10.1021/acscatal.1c01204 (2021).
- Nobuyasu Koga, Rie Koga, Gaohua Liu, Javier Castellanos, Gaetano T. Montelione & David Baker
Role of backbone strain in de novo design of complex α/β protein structures
Nature Communications volume 12, Article number: 3921; doi.org/10.10.38/s41467-021-2450-7 (2021)
- H. Kuramochi and T. Tahara
Tracking Ultrafast Structural Dynamics by Time-Domain Raman Spectroscopy
Journal of the American Chemical Society 143, 26, 9699-9717; doi.org/10.1021/jacs.1c02545 (2021).
- Y. Kawasugi, H. Masuda, M. Uebe, H. M. Yamamoto, R. Kato, Y. Nishio, N. Tajima,
Pressure-induced phase switching of Shubnikov-de Haas oscillations in the molecular Dirac fermion system α−(BETS)2I3
Physical Review B 103, 20, 205140; doi.org/10.1103/PhysRevB.103.205140 (2021).
- F. Pop, C. Meziere, M. Allain, P. Auban-Senzier, N. Tajima, D. Hirobe, H. M. Yamamoto, E. Canadell, N. Avarvari,
Unusual stoichiometry, band structure and band filling in conducting enantiopure radical cation salts of TM-BEDT-TTF showing helical packing of the donors
Journal of Materials Chemistry C 2021, 9, 10777-10786; doi.org/10.1039/D1TC01112J (2021).
- H. Yamakawa, T. Miyamoto, T. Morimoto, N. Takamura, S. Liang, H. Yoshimochi, T. Terashige, N. Kida, M. Suda, H. M. Yamamoto, H. Mori, K. Miyagawa, K. Kanoda, H. Okamoto,
Terahertz-field-induced polar charge order in electronic-type dielectrics
Nature Communications 12, 953; doi.org/10.1038/s41467-021-20925-x (2021).
- Y. Nagaoka, M. Suda, I. Yoon, N. Chen, H. Yang, Y. Liu, B. A. Anzures, S. W. Parman, Z. Wang, M. Grunwald, H. M. Yamamoto, O. Chen,
Bulk Grain-Boundary Materials from Nanocrystals
Chem 7, 2, 509-525; doi.org/10.1016/j.chempr.2020.12.026 (2021).
- R. Yoshimoto, S. Yamashita, H. Akutsu, Y. Nakazawa, T. Kusamoto, Y. Oshima, T. Nakano, H. M. Yamamoto, R. Kato,
Electric dipole induced bulk ferromagnetism in dimer Mott molecular compounds
Scientific Reports 11, 1332; doi.org/10.1038/s41598-020-79262-6 (2021).
- Y. Kawasugi, H. M. Yamamoto,
2020
- A. Pachariyangkun, M. Suda, S. Hadsadee, S. Jungsuttiwong, P. Nalaoh, P. Pattanasattayavong, T. Sudyoadsuk, H. M. Yamamoto, V. Promarak,
Effect of thiophene/furan substitution on organic field effect transistor properties of arylthiadiazole based organic semiconductors
Journal of Materials Chemistry C 2020, 8, 17297-17306; doi.org/10.1039/D0TC04982D (2020).
- Rie Koga, Mami Yamamoto, Takahiro Kosugi, Naohiro Kobayashi, Toshihiko Sugiki, Toshimichi Fujiwara, and Nobuyasu Koga
Robust folding of a de novo designed ideal protein even with most of the core mutated to valine
Proceedings of the National Academy of Sciences of the United States of America ,doi.org/10.1073/pnas.2002120117（2020）
- Y. Kawakami, T. Amano, H. Ohashi, H. Ito, Y. Nakamura, H. Kishida, T. Sasaki, G. Kawaguchi, H. M. Yamamoto, K. Yamamoto, S. Ishihara, K. Yonemitsu, and S. Iwai
Petahertz non-linear current in a centrosymmetric organic superconductor
Nature Communications volume 11, Article number: 4138(2020)
- Y. Kawakami, T. Amano, H. Ohashi, H. Itoh, Y. Nakamura, H. Kishida, T. Sasaki, G. Kawaguchi, H. M. Yamamoto, K. Yamamoto, S. Ishihara, K. Yonemitsu, S. Iwai,
Petahertz non-linear current in a centrosymmetric organic superconductor
Nature Communications 11, 4138; doi.org/10.1038/s41467-020-17776-3 (2020).
- Y. Nabei, D. Hirobe, Y. Shimamoto, K. Shiota, A. Inui, Y. Kousaka, Y. Togawa, H. M. Yamamoto,
Current-induced bulk magnetization of a chiral crystal CrNb3S6
Applied Physics Letters 117, 5, 052408; doi.org/10.1063/5.0017882 (2020).
- Ito-Miwa K, Furuike Y, Akiyama S, Kondo T
Tuning the circadian period of cyanobacteria up to 6.6 days by the single amino acid substitutions in KaiC
Proceedings of the National Academy of Sciences of the United States of America; doi.org/10.1073/pnas.2005496117 (2020)
- A. Inui, R. Aoki, Y. Nishiue, K. Shiota, Y. Kousaka, H. Shishido, D. Hirobe, M. Suda, J. Ohe, J. Kishine, H. M. Yamamoto, Y. Togawa,
Chirality-Induced Spin-Polarized State of a Chiral Crystal CrNb3S6
Physical Review Letters 124, 16, 166602; doi.org/10.1103/PhysRevLett.124.166602 (2020).
- A. Pachariyangkun, M. Suda, S. Hadsadee, S. Jungsuttiwong, P. Nalaoh, P. Pattanasattayavong, T. Sudyoadsuk, H. M. Yamamoto, V. Promarak,
2019
- Mukaiyama A, Furuike Y, Akiyama S
A kinetic mechanism gating the assembly of KaiB-KaiC complex in the cyanobacterial circadian clock system
Biological Rhythms, 29-34 (2019)
- Rie Koga , Nobuyasu Koga
Consistency principle for protein design
Biophysics and Physicobiology 16, 304-309; doi.org/10.2142/biophysico.16.0_304(2019)
- G. Kawaguchi, H. M. Yamamoto,
Control of Organic Superconducting Field-Effect Transistor by Cooling Rate
Crystals 9,11, 605; doi.org/10.3390/cryst9110605 (2019).
- Y. Kawasugi, K. Seki, J. Pu, T. Takenobu, S. Yunoki, H. M. Yamamoto, R. Kato,
Non-Fermi-liquid behavior and doping asymmetry in an organic Mott insulator interface
Physical Review B 100, 11, 115141; doi.org/10.1103/PhysRevB.100.115141 (2019).
- H. Murakoshi, H. Horiuchi, T. Kosugi, M. Onda, A. Sato, N. Koga, J. Nabekura
ShadowR: a novel chromoprotein with reduced non-specific binding and improved expression in living cells
Scientific Reports 9, 12072; doi.org/ 10.1038/s41598-019-48604-4 (2019).
- C. Jongwohan, Y. Honda, T. Suzuki, T. Fujinami, K. Adachi and N. Momiyama
Brønsted Acid-Initiated Formal [1,3]-Rearrangement Dictated by β-Substituted Ene-Aldimines
Organic Letters 2019, 21, 4991-4995, doi:10.1021/acs.orglett.9b01533 (2019)
- Ouyang D, Furuike Y, Mukaiyama A, Ito-Miwa K, Kondo T, Akiyama S
Development and Optimization of Expression, Purification, and ATPase Assay of KaiC for Medium-Throughput Screening of Circadian Clock Mutants in Cyanobacteria
International Journal of Molecular Science 20, 2789-2800; doi: 10.3390/ijms20112789 (2019)
- M. Suda, Y. Thathong, V. Promarak, H. Kojima, M. Nakamura, T. Shiraogawa, M. Ehara and H. M. Yamamoto
Light-driven Molecular Switch for Reconfigurable Spin Filters
Nature Communications 10,2455,doi:10.1038/s41467-019-10423-6 (2019)
- Y. Kawasugi, K. Seki, S. Tajima, J. Pu, T. Takenobu, S. Yunoki, H. M. Yamamoto and R. Kato
Two-dimensional ground-state mapping of a Mott-Hubbard system in a flexible field-effect device
Science Advances 5, eaav7282, DOI:10.1126/sciadv.aav7282 (2019)
- Okumura M, Noi K, Kanemura S, Kinoshita M, Saio T, Inoue Y, Hikima T, Akiyama S, Ogura T, Inaba K
Dynamic assembly of protein disulfide isomerase in catalysis of oxidative folding
Nature Chemical Biology 15, 499-509; doi: 10.1038/s41589-019-0268-8 (2019)
- S. Basak, R. P. Nobrega, D. Tavella, L.M. Deveau, N. Koga, R. Tatsumi-Koga, D. Baker, F. Massi, C. R. Matthews
Networks of electrostatic and hydrophobic interactions modulate the complex folding free energy surface of a designed βα protein
Proceedings of the National Academy of Sciences of the United States of America 116, 14, 6806-6811; doi.org/10.1073/pnas.1818744116 (2019).
- Y. Nakayama, R. Tsuruta, N. Moriya, M. Hikasa, M. Meissner, T. Yamaguchi, Y. Mizuno, T. Suzuki, T. Koganezawa, T. Hosokai, T. Ueba and S. Kera
Widely Dispersed Intermolecular Valence Bands of Epitaxially Grown Perfluoropentacene on Pentacene Single Crystals
Journal of Physical Chemistry Letters 2019, 10(6), 1312-1318, doi: 10.1021/acs.jpclett.8b03866 (2019)
- Mukaiyama A, Furuike Y, Akiyama S
2018
- G. Kawaguchi, A. A. Bardin, M. Suda, M. Uruichi and H. M. Yamamoto
An Ambipolar Superconducting Field‐Effect Transistor Operating above Liquid Helium Temperature
Advanced Materials 31, 1805715,doi:10.1002/adma.201805715 (2018)
- Furukawa Y, Lim C, Tosha T, Yoshida K, Hagai T, Akiyama S, Watanabe S, Nakagome K, Shiro Y
Identification of a novel zinc-binding protein, C1orf123, as an interactor with a heavy metal-associated domain
PLoS One 13, e0204355; doi: 10.1371/journal.pone.0204355 (2018)
- Y. Kawakami, T. Amano, Y. Yoneyama, Y. Akamine, H. Itoh, G. Kawaguchi, H. M. Yamamoto, H. Kishida, K. Itoh, T. Sasaki, S. Ishihara, Y. Tanaka, K. Yonemitsu & S. Iwai
Nonlinear charge oscillation driven by a single-cycle light field in an organic superconductor
Nature Photonics (2018)
- Mukaiyama A, Furuike Y, Abe J, Yamashita E, Kondo T, Akiyama S
Conformational rearrangements of the C1 ring in KaiC measure the timing of assembly with KaiB
Scientific Reports 8, 8803 (2018)
- T. Chooppawa, M. Suda, M. Uruichi, M. Kunaseth, S. Namuangruk, P. Rashatasakhon, H. M. Yamamoto,
Development of highly soluble perylenetetracarboxylic diimide derivative for n-type monolayer field-effect-transistor
Molecular crystals and liquid crystals 669, 94-105; doi.org/10.1080/15421406.2018.1553760 (2018).
- H. Oike, M. Suda, M. Kamitani, A. Ueda, H. Mori, Y. Tokura, H. M. Yamamoto, and F. Kagawa,
Size effects on supercooling phenomena in strongly correlated electron systems: IrTe2 and θ−(BEDT−TTF)2RbZn(SCN)4
Physical Review B, 97, 8, 085102; doi.org/10.1103/PhysRevB.97.085102 (2018).
- H. M. Yamamoto, M. Suda and Y. Kawasugi
Organic Phase-Transition Transistor with Strongly Correlated Electrons
Japanese Journal of Applied Physics 57, 03EA02 (2018)
- G. Kawaguchi, A. A. Bardin, M. Suda, M. Uruichi and H. M. Yamamoto
2017
- Akiyama S, Mukaiyama A, Abe J, Furuike Y
Cyanobacterial circadian clock system: how and why can it be so slow and stable?
Biological Clocks: with reference to suprachiasmatic nucleus, 73-77 (2017)
- E. Tisserond, J. N. Fuchs, M. O. Goerbig, P. Auban-Senzier, C. Meziere, P. Batail, Y. Kawasugi, M. Suda, H. M. Yamamoto, R. Kato, N. Tajima and M. Monteverde,
Aperiodic quantum oscillations of particle-hole asymmetric Dirac cones
Europhysics Letters 119, 6, 67001; doi.org/10.1209/0295-5075/119/67001 (2017).
- M. Suda, H. M. Yamamoto,
Field-, strain- and light-induced superconductivity in organic strongly correlated electron systems
Physical Chemistry Chemical Physics, 2018 ,20, 1321-1331; doi.org/10.1039/C7CP06716J (2017).
- Fan Yang ,Masayuki Suda , and Hiroshi M. Yamamoto
Fabrication and Operation of Monolayer Mott FET at Room Temperature
Bulletin of the Chemical Society of Japan 90, 1259-1266(2017)
- H. Yamakawa, T. Miyamoto, T. Morimoto, T. Terashige, H. Yada, N. Kida, M. Suda, H. M. Yamamoto, R. Kato, K. Miyagawa, K. Kanoda, H. Okamoto
Mott transition by an impulsive dielectric breakdown
Nature Materials 16, 1100-1105 (2017)
- Y.-R. Lin, N. Koga, R. Tatsumi-Koga, G. Liu, A. F. Clouser, G. T. Montelione and D.Baker
Cyclic oligomer design with de novo αβ-proteins
PROTEIN SCIENCE 26(11),2187-2194 , doi:10.1002/pro.3270（2017）
- Y. Sakamoto and T. Suzuki
Perfluorinated and Half-Fluorinated Rubrenes: Synthesis and Crystal Packing Arrangements
Journal of Organic Chemistry 82, 8111-8116, doi:10.1021/acs.joc.7b01383 (2017)
- Youichi Sakamoto and Toshiyasu Suzuki
Perfluorinated and Half-Fluorinated Rubrenes: Synthesis and Crystal Packing Arrangements
The Journal of Organic Chemistry 82, 8111-8116 (2017)
- Masayuki Suda, Naoto Takashina, Supawadee Namuangruk, Nawee Kungwan, Hidehiro Sakurai, Hiroshi M. Yamamoto
N-Type Superconductivity in an Organic Mott Insulator Induced by Light-Driven Electron-Doping
Advanced Materials 29, 1606833(2017)
- Nuemket N, Yasui N, Kusakabe Y, Nomura Y, Atsumi N, Akiyama S, Nango E, Kato Y, Kaneko M K, Takagi J, Hosotani M, Yamashita A
Structural basis for perception of diverse chemical substances by T1r taste receptors
Nature Communications 8, 15530 (2017)
- K. Soma, S. Konings, R. Aso, N. Kamiuchi, G. Kobayashi, H. Yoshida, S. Takeda
Detecting dynamic responses of materials and devices under an alternating electric potential by phase-locked transmission electron microscopy
Ultramicroscopy 181, 27-41 (2017)
- Yutaka SHIKANO
How to Realize One-dimensional Discrete-time Quantum Walk by Dirac Particle
Interdisciplinary Information Sciences 23, 33-37(2017)
- Anzai I, Tokuda E, Mukaiyama A, Akiyama S, Endo F, Yamanaka K, Misawa H, Furukawa Y
A misfolded dimer of Cu/Zn-superoxide dismutase leading to pathological oligomerization in amyotrophic lateral sclerosis
Protein Science 26, 484-496 (2017)
- A. Watanabe, G. Kobayashi, N. Matsui, M. Yonemura, A. Kubota, K. Suzuki, M. Hirayama and R. Kanno
Ambient Pressure Synthesis and H- Conductivity of LaSrLiH2O2
Electrochemistry 85(2), 88-92 (2017)
- Yoshiaki Sato , Yoshitaka Kawasugi, Masayuki Suda, Hiroshi M. Yamamoto, and Reizo Kato
Critical Behavior in Doping-Driven Metal-Insulator Transition on Single-Crystalline Organic Mott-FET
Nano Letters 17 708-714(2017)
- Akiyama S, Mukaiyama A, Abe J, Furuike Y
2016
- Yoshitaka Kawasugi, Kazuhiro Seki, Yusuke Edagawa, Yoshiaki Sato, Jiang Pu, Taishi Takenobu, Seiji Yunoki, Hiroshi M. Yamamoto, and Reizo Kato
Simultaneous enhancement of conductivity and Seebeck coefficient in an organic Mott transistor
Applied Physics Letters 109, 233301 (2016)
- Tomoyuki Horikiri, Makoto Yamaguchi, Kenji Kamide, Yasuhiro Matsuo, Tim Byrnes, Natsuko Ishida, Andreas Löffler, Sven Höfling, Yutaka Shikano, Tetsuo Ogawa, Alfred Forchel and Yoshihisa Yamamoto
Erratum: High-energy side-peak emission of exciton-polariton condensates in high density regime
Scientific Reports 6, 35094 (2016)
- Kanemura S, Okumura M, Yutani K, Ramming T, Hikima T, Appenzeller-Herzog C, Akiyama S, Inaba K
Human ER Oxidoreductin-1α (Ero1α) Undergoes Dual Regulation through Complementary Redox Interactions with Protein-Disulfide Isomerase(PDI)
Journal of Biological Chemistry 291, 23952-23964 (2016)
- Furuike Y, Abe J, Mukaiyama A, Akiyama S
Accelerating in vitro studies on circadian clock systems using an automated sampling device
Biophysics and Physicobiology 13, 235-241; doi: 10.2142/biophysico.13.0_235 (2016)
- S.Goto
Contact geometric descriptions of vector fields on dually flat spaces and their applications in electric circuit models and nonequilibrium statistical mechanics
Journal of Mathematical Physics 57, 102702 (41 Pages) (2016)
- Anzai I, Toichi K, Tokuda E, Mukaiyama A, Akiyama S, Furukawa Y
Screening of Drugs Inhibiting In vitro Oligomerization of Cu/Zn-Superoxide Dismutase with a Mutation Causing Amyotrophic Lateral Sclerosis
Frontiers in Molecular Biosciences 3, 40; doi: 10.3389/fmolb.2016.00040 (2016)
- Yoshitaka Kawasugi, Kazuhiro Seki, Yusuke Edagawa, Yoshiaki Sato, Jiang Pu, Taishi Takenobu, Seiji Yunoki, Hiroshi M. Yamamoto, & Reizo Kato
Electron-Hole Doping Asymmetry of Fermi Surface Reconstructed in a Simple Mott Insulator
Nature Communications 7 ,12356(2016)
- G. KOBAYASHI
Development of H- Conductor and the Application Possibility as a Solid Electrolyte
Energy Device 3(6), 1-6 (2016) (in Japansese)
- Kazutaka G. Nakamura, Kazuma Ohya, Hiroshi Takahashi, Tetsuya Tsuruta, Hiroya Sasaki, Shin-ichi Uozumi, Katsura Norimatsu, Masahiro Kitajima, Yutaka Shikano, and Yosuke Kayanuma
Spectrally resolved detection in transient-reflectivity measurements of coherent optical phonons in diamond
Physical Review B 94, 024303 (7pages) (2016)
- Syuma Yasuzuka, Shinya Uji, Takako Konoike, Taichi Terashima, David Graf, Eun Sang Choi, James S. Brooks, Hiroshi M. Yamamoto, and Reizo Kato
Shubnikov-de Haas Effect and Angular-Dependent Magnetoresistance in Layered Organic Conductor β′′-(ET)(TCNQ)
Journal of the Physical Society of Japan 85, 084701（7Pages）(2016)
- S.Goto, R.W.Tucker and T.J. Walton
The Dynamics of Compact Laser Pulses
Journal of Physics A: Mathematical and Theoretical 49, 265203 (11 pages) (2016)
- Tomoyuki Horikiri, Makoto Yamaguchi, Kenji Kamide, Yasuhiro Matsuo, Tim Byrnes, Natsuko Ishida, Andreas Löffler, Sven Höfling, Yutaka Shikano, Tetsuo Ogawa, Alfred Forchel, and Yoshihisa Yamamoto
High-energy side-peak emission of exciton-polariton condensates in high density regime
Scientific Reports 6, 25655 (11pages) (2016)
- Nango E, Akiyama S, Maki-Yonekura S, Ashikawa Y, Kusakabe Y, Krayukhina E, Maruno T, Uchiyama S, Nuemket N, Yonekura K, Shimizu M, Atsumi N, Yasui N, Hikima T, Yamamoto M, Kobayash Y, Yamashita A
Taste substance binding elicits conformational change of taste receptor T1r heterodimer extracellular domains
Scientific Reports 6, 25745; doi: 10.1038/srep25745 (2016)
- Y. Kuroda, Y. Sakamoto, T. Suzuki, E. Kayahara, S. Yamago
Tetracyclo(2,7-carbazole)s: Diatropicity and Paratropicity of Inner Regions of Nanohoops
The Journal of Organic Chemistry 81, 3356-3363 (2016)
- G. Kobayashi, Y. Hinuma, S. Matsuoka, A. Watanabe, M. Iqbal, M. Hirayama, M. Yonemura, T. Kamiyama, I. Tanaka, R. Kanno
Pure H-conduction in oxyhydrides
Science 351, 1314-1317 (2016)
- Abe J, Mukaiyama A, Akiyama S
Absolute slowness encoded in the circadian clock protein KaiC
SPring-8 Research Frontiers 2015, 24-25 (2016)
- Furukawa Y, Anzai I, Akiyama S, Imai M, Cruz FJC, Saio T, Nagasawa K, Nomura T, and Ishimori K
Conformational Disorder of the Most Immature Cu, Zn-Superoxide Dismutase Leading to Amyotrophic Lateral Sclerosis
Journal of Biological Chemistry 291, 4144-4155 (2016)
- Akiyama S
Interplay of Chronobiology & Synchrotron Radiation Research
J. JSSRR 29(2), 56-63 (2016) (in Japanese)
- H. Yamakawa, T. Miyamoto, T. Morimoto, H. Yada, Y. Kinoshita, M. Sotome, N. Kida, K. Yamamoto, K. Iwano, Y. Matsumoto, S. Watanabe, Y. Shimoi, M. Suda, H. M. Yamamoto, H. Mori and H. Okamoto
Novel electronic ferroelectricity in an organic charge-order insulator investigated with terahertz-pump optical-probe spectroscopy
Scientific Reports 6, 20571 (2016)
- M. Iqbal, K. Suzuki, G. Kobayashi, G. Zhao, M. Hirayama, R. Kanno
Lithium ion conduction in doped LaLiO2 system
Solid State Ionics 285, 33-37 (2016)
- Furukawa Y, Suzuki Y, Fukuoka M, Nagasawa K, Nakagome K, Shimizu H, Mukaiyama A, Akiyama S
A molecular mechanism realizing sequence-specific recognition of nucleic acids by TDP-43
Scientific Reports 6, 20576; doi: 10.1038/srep20576 (2016)
- S.Goto, R.W.Tucker, T.J.Walton
Classical dynamics of free electromagnetic laser pulses
Nucl. Instrum. Methods Phys. Res., Sect. B 369, 40-44 (2016)
- Abe J, Mukaiyama A, Akiyama S
Slow ATP Hydrolysis Reaction Designed in the Atomic Structure of Circadian Clock Protein KaiC
SPring-8/SACLA Information 21, 2-4 (2016) (in Japanese)
- R. KOGA and N. KOGA
De Novo Computational Protein Design: Toward Custom Made Generation of Protein Structures
Kagaku 71, 42-46 (2016) (in Japanese)
- G. Kobayashi, Y. Irii, F. Matsumoto, A. Ito, Y. Ohsawa, S. Yamamoto, Y. Cui, J.-Y. Son, and Y. Sato
Improving Cycling Performance of Li[Li0.2Ni0.18Co0.03Mn0.58]O2 through Combination of Al2O3-based Surface Modification and Stepwise Pre-cycling
Journal of Power Sources 303, 250-256 (2016)
- Yoshitaka Kawasugi, Kazuhiro Seki, Yusuke Edagawa, Yoshiaki Sato, Jiang Pu, Taishi Takenobu, Seiji Yunoki, Hiroshi M. Yamamoto, and Reizo Kato
2015
- J. Mannhart, and H. Hilgenkamp, and H. M. Yamamoto
Thee-terminal device
Reference Module in Materials Science and Materials Engineering, ed. by Saleem Hashmi (2015)
- Akio Hosoya, Koji Maruyama, and Yutaka Shikano
Operational derivation of Boltzmann distribution with Maxwell's demon model
Scientific Reports 5, 17011 (9pages) (2015)
- E. Kayahara, R. Qu, M. Kojima, T. Iwamoto, T. Suzuki, S. Yamago
Ligand-Controlled Synthesis of [3]- and [4]Cyclo-9,9-dimethyl-2,7-fluorenes through Triangle- and Square-Shaped Platinum Intermediates
Chemistry - A European Journal 21, 18939-18943 (2015)
- Mukaiyama A, Abe J, Son S, Akiyama S
Atomic-Scale Origins of Slowness in the Cyanobacterial Circadian Clock
Jikkenigaku 33, 3119-3122 (2015) (in Japanese)
- Kentaro Soma, Stan Konings, Genki Kobayashi and Seiji Takeda
B12-O-05 Towards Dynamic Electron Holographic Analysis of Solid State Electrochemical Devices at Operating Condition
Microscopy 64, i21 (2015)
- Kazutaka G. Nakamura, Yutaka Shikano, and Yosuke Kayanuma
Influence of pulse width and detuning on coherent phonon generation
Physical Review B 92, 144304 (7pages) (2015)
- Yu-Ru Lin, Nobuyasu Koga, Rie Tatsumi-Koga, Gaohua Liu, Amanda F. Clouser, Gaetano T. Montelione, David Baker
Control over overall shape and size in de novo designed proteins
Proceedings of the National Academy of Sciences of the United States of America 112(40), E5478-5485 (2015)
- Yusuf Turek, Hirokazu Kobayashi, Tomotada Akutsu, Chang-Pu Sun, and Yutaka Shikano
Post-selected von Neumann measurement with Hermite-Gaussian and Laguerre-Gaussian pointer states
New Journal of Physics 17, 083029 (17pages) (2015)
- Yusuf Turek, Wulayimu Maimaiti, Yutaka Shikano, Chang-Pu Sun, and Mohammad Al-Amri
Advantages of nonclassical pointer states in postselected weak measurements
Physical Review A 92, 022109 (8pages) (2015)
- S. Tsusima, W. Hung, P. Deevanhxay, G. Kobayashi, R. Kanno, S. Hirai
In Situ X-ray Visualization of the Lithiation Process in a Porous Graphite Electrode in an Operating Li-Ion Cell
ChemElectroChem 2, 1535-1540 (2015)
- Abe J, Hiyama T B, Mukaiyama A, Son S, Mori T, Saito S, Osako M, Wolanin J,
Yamashita E, Kondo T, and Akiyama S
Atomic-scale Origins of Slowness in the Cyanobacterial Circadian Clock
Science 349, 312-316 (2015)
- Z. Qiu, M. Uruichi, D. Hou, K. Uchida, H. M. Yamamoto and E.Saitoh
Spin-current injection and detection in κ-(BEDT-TTF)2Cu[N(CN)2]Br
AIP Advances 5, 057167 (2015)
- Giuseppe Di Molfetta, Lauchlan Honter, Ben B. Luo, Tatsuaki Wada, and Yutaka Shikano
Massless Dirac Equation from Fibonacci Discrete-Time Quantum Walk
Quantum Studies: Mathematics and Foundations 2, 243 - 252 (10pages) (2015)
Erratum to: Massless Dirac Equation from Fibonacci Discrete-Time Quantum Walk Quantum Studies: Mathematics and Foundations 2, 253 - 254 (2pages) (2015)
- Mukaiyama A, Osako M, Hikima T, Kondo T, and Akiyama S
A protocol for preparing nucleotide-free KaiC monomer
BIOPHYSICS 11, 79-84 (2015)
- F. Anger, H. Glowatzki, A. Franco-Cañellas, C. Bürker, A. Gerlach, R. Scholz, Y. Sakamoto, T. Suzuki, N. Koch, F. Schreiber
Interface Dipole and Growth Mode of Partially and Fully Fluorinated Rubrene on Au(111) and Ag(111)
The Journal of Physical Chemistry C 119, 6769-6776 (2015)
- Masayuki Suda, Reizo Kato, and Hiroshi M. Yamamoto
Light-induced superconductivity using a photo-active electric double layer
Science,347, 743-746 (2015)
- Yutaka Shikano
These from Bits
in It From Bit or Bit From It?, Chapter 10, 113-118 (Springer, Switzerland, 2015)
- Ryo Sakuma, Hashimoto Hideki, Genki Kobayashi, Tatsuo Fujii, Makoto Nakanishi, Ryoji Kanno, Mikio Takano, Jyun Takada
High-rate performance of a bacterial iron-oxide electrode for lithium-ion battery
Materials Letters 139, 414-417 (2015)
- J. Mannhart, and H. Hilgenkamp, and H. M. Yamamoto
2014
- Genki Kobayashi, Yuichi Sato
Solid electrolytes, basic and evaluation method of all solid-state secondary batteries
Electrochemistry 82, 1108-1113 (2014)
- J. Sugiyama, H. Nozaki, M. Harada, Y. Higuchi, J. Brewer, A. H. Jess, J. Eduardo, G. Kobayashi and R. Kanno
Variation of local magnetic enviroments in olivine-type compounds: Na0.7FePO4 and FePO4
Physical Review B 90, 014426/1-014426/10 (2014)
- Cyprien Lemouchi, Hiroshi M. Yamamoto, Reizo Kato, Sergey Simonov, Leokadiya Zorina, Antonio Rodriguez-Fortea , Enric Canadell, Pawel Wzietek, Konstantinos Iliopoulos, Denis Gindre, Michael Chrysos, and Patrick Batail
Reversible Control of Crystalline Rotors by Squeezing Their Hydrogen Bond Cloud Across a Halogen Bond-Mediated Phase Transition
Crystal Growth & Design 14, 3375-3383 (2014)
- Atsushi Noguchi, Yutaka Shikano, Kenji Toyoda, and Shinji Urabe
Aharonov-Bohm effect in the tunnelling of a quantum rotor in a linear Paul trap
Nature Communications 5, 3868 (2014)
- T. Iwamoto, E. Kayahara, N. Yasuda, T. Suzuki, S. Yamago
Synthesis, Characterization, and Properties of [4]Cyclo-2,7-pyrenylene: Effects of Cyclic Structure on the Electronic Properties of Pyrene Oligomers
Angewandte Chemie International Edition 53, 6430-6434 (2014)
- Hirokazu Kobayashi, Koji Nonaka, and Yutaka Shikano
Stereographical visualization of a polarization state using weak measurements with an optical-vortex beam
Physical Review A 89, 053816 (2014). Editor's Suggestion
- Hiroshi M. Yamamoto, Yoshitaka Kawasugi, Hengbo Cui, Masaki Nakano, Yoshihiro Iwasa, and Reizo Kato
Asymmetric Phase Transitions Observed at the Interface of a Field-Effect Transistor Based on an Organic Mott Insulator
European Journal of Inorganic Chemistry 2014, 3841-3844 (2014)
- C. Hansen, K. Kubota, G. Kobayashi, M. Hirayama, R. Kanno
High-pressure synthesis and electrochemical properties of lighium transition metal oxides with layered rock-salt structure
Journal of Power Sources 252, 1-7 (2014)
- Masayuki Suda, Yoshitaka Kawasugi, Takeo Minari, Kazuhito Tsukagoshi, Reizo Kato and Hiroshi M. Yamamoto
Strain-Tunable Superconducting Field-Effect Transistor with an Organic Strongly-Correlated Electron System
Advanced Materials 26, 3490-3495 (2014)
- H. Hashimoto, G. Kobayashi, R. Sakuma, T. Fujii, N. Hayashi, T. Tomoko, R. Kanno, M. Takano, J. Takada
Bacterial nanometric amorphous Fe-based oxide: a otential lithium-ion battery anode material
ACS Applied Materials & Interfaces 6, 5374-5378 (2014)
- Kojima R, Okumura M, Masui S, Kanemura S, Inoue M, Saiki M, Yamaguchi H, Hikima T, Suzuki M, Akiyama S and Inaba K.
Radically Different Thioredoxin Domain Arrangement of ERp46, an Efficient Disulfide Bond Introducer of the Mammalian PDI Family
Structure 22, 431-443 (2014)
- Yutaka Shikano, Tatsaki Wada, and Junsei Horikawa
Discrete-time quantum walk with feed-forward quantum coin
Scientific Reports 4, 4427 (2014)
- Hiroshi M. Yamamoto
Sheathed nanowires aligned by crystallographic periodicity: a possibility of cross-bar wiring in three-dimensional space
CrystEngComm 16, 2857 - 2868 (2014)
- Genki Kobayashi, Yuichi Sato
2013
- Yuki Susa, Yutaka Shikano, and Akio Hosoya
Reply to "Comment on 'Optimal probe wave function of weak-value amplification' "
Physical Review A 87, 046102 (2 pages) (2013)
- Ali Ü. C. Hardal, Peng Xue, Yutaka Shikano, Özgür E. Müstecaplioglu, and Barry C. Sanders
Discrete-time quantum walk with nitrogen-vacancy centers in diamond coupled to a superconducting flux qubit
Physical Review A 88, 022303 (11 pages) (2013)
- Yutaka Shikano, Etsuo Segawa, Armando Perez, and Jingbo Wang
A Special Issue on Theoretical and Mathematical Aspects of Discrete Time Quantum Walks
Journal of Computational and Theoretical Nanoscience 10, 1555-1556 (2 pages) (2013)
- Meltem Gönülol, Ekrem Aydiner, Yutaka Shikano, and Özgür E. Müstecaplioglu
Survival Probability in a Quantum Walk on a One-Dimensional Lattice with Partially Absorbing Traps
Journal of Computational and Theoretical Nanoscience 10, 1596-1600 (5 pages) (2013)
- Yutaka Shikano
From Discrete Time Quantum Walk to Continuous Time Quantum Walk in Limit Distribution
Journal of Computational and Theoretical Nanoscience 10, 1558-1570 (12 pages) (2013)
- E. Kayahara, T. Iwamoto, H. Takaya, T. Suzuki, M. Fujitsuka, T. Majima, N. Yasuda, N. Matsuyama, S. Seki, S. Yamago
Synthesis and Physical Properties of a Ball-Like Three-Dimensional π-Conjugated Molecule
Nature Communications 4, 2694 (2013)
- Yamamoto H. M., Ueno J. and Kato R.
Critical behavior of a flling-controlled Mott-transition observed at an organic field-effect-transistor interface
The European Physical Journal Special Topics 222, 1057-1063 (2013)
- Tetsuro Kusamoto, Hiroshi M. Yamamoto and Reizo Kato
Utilization of σ-Holes on Sulfur and Halogen Atoms for Supramolecular Cation···Anion Interactions in Bilayer Ni(dmit)2 Anion Radical Salts
Crystal Growth & Design 13, 10, 4533-4541; doi.org/10.1021/cg401028u (2013).
- Y. Sakamoto, T. Suzuki
Tetrabenzo[8]circulene: Aromatic Saddles from Negatively Curved Graphene
Journal of the American Chemical Society 135, 14074-14077 (2013)
- Tajima N, Yamauchi T, Yamaguchi T, Suda M, Kawasugi Y, Yamamoto H. M, Kato R, Nishio Y and Kajita K
Quantum Hall effect in multilayered massless Dirac fermion systems with tilted cones
Physical Review B 88, 075315/1-6 (2013)
- Yamamoto H. M, Nakano M, Suda M, Iwasa Y, Kawasaki M and Kato R
A strained organic field-effect transistor with a gate-tunable superconducting channel
Nature Communications 4, 2379/1-7 (2013)
- Tomoyuki Horikiri, Yasuhiro Matsuo, Yutaka Shikano, Andreas Löffler,Sven Höfling, Alfred Forchel, and Yoshihisa Yamamoto
Temperature Dependence of Highly Excited Exciton Polaritons in Semiconductor Microcavities
Journal of the Physical Society of Japan 82, 084709 (2013) .
- M. Iqbal, G. Kobayashi, M. Hirayama, R. Kanno
Synthesis, structure and electrochemical properties of layered La2Li2x(CO3)1-xO2+2x
Journal of Solid State Chemistry, 206, 14-19 (2013)
- S. Kera, S. Hosoumi, K. Sato, H. Fukagawa, S. Nagamatsu, Y. Sakamoto, T. Suzuki, H. Huang, W. Chen, A. T. S. Wee, V. Coropceanu, N. Ueno
Experimental Reorganization Energies of Pentacene and Perfluoropentacene: Effects of Perfluorination
The Journal of Physical Chemistry C 117, 22428-22437 (2013)
- F. Anger, R. Scholz, E. Adamski, K. Broch, A. Gerlach, Y. Sakamoto, T. Suzuki, F. Schreiber
Optical Properties of Fully and Partially Fluorinated Rubrene in Films and Solution
Applied Physics Letters 102, 013308 (2013).
- E. Kayahara, T. Iwamoto, T. Suzuki, S. Yamago
Selective Synthesis of [6]-, [8]-, and [10]Cycloparaphenylenes
Chemistry Letters 42, 621-623 (2013)
- Yuki Susa, Yutaka Shikano, and Akio Hosoya
Presentations
2019
- Akiyama S
Keynote Lecture: Frontiers of the Intermolecular Interactions Analysis of Biomolecules promoted by BioSAS
PF Workshop, Tsukuba, Japan ,2019/9/12
- Akiyama S
ATPase-based in vitro Screening for KaiC Clock Mutants in Cyanobacteria
XVI Congress of the European Biological Rhythms Society, Lyon, France ,2019/8/27
- Akiyama S
Keynote Lecture: Cyanobacterial circadian clock system through the chemistry of rhythm, structure, and evolutionary diversity
V World Congress of Chronobiology, Suzhou,China ,2019/4/25
- Akiyama S
2018
- Akiyama S
Slowness and temperature compensation both transferred from intra- to inter-molecular scales in cyanobacterial circadian clock
The 91st Annual Meeting of the Japanese Biochemical Society, Kyoto, Japan, 2018/9/24
- Akiyama S
trans-Hierarchical Nature of Cyanobacterial Circadian Clock System
SRBR 2018, Sapporo, Japan ,2018/7/14
- Akiyama S
trans-Hierarchical Nature of Cyanobacterial Circadian Clock System
Frontier Bioorganization Forum 2018, Okazaki, Japan, 2018/7/8
- Akiyama S
Slow and Temperature-compensated ATP Hydrolysis Reaction Catalyzedby Circadian Clock Protein KaiC
The 3rd Solar FuelMaterial Workshop, Osaka, Japan, 2018/3/13
- Akiyama S
2017
- Akiyama S
Cyanobacterial circadian clock system: How and why can it be so slow and stable?
Sokendai Asian Winter School, Okazaki, Japan , 2017/12/15
- Akiyama S
Frequency characteristics as a basis for meta-tuning of the Cyanobacterial Circadian Clock
ConBio2017, Kobe ,Japan ,2017/12/9
- Genki Kobayashi
Hydride Ion Conduction in Oxyhydrides
3rd Solid-State Chemistry & Ionics (SCI) workshop: Bulk diffusion and surface of oxides , Kyusyu-Univ., Japan, 2017/11/7
- Genki Kobayashi
Synthesis and H- Conductivity of Ba-Li oxyhydride
IUMRS-ICAM 2017 15th International Conference of Advanced Materials , Kyoto, Japan, 2017/8/27-9/1
- Akiyama S
The frontier in cyanobacterial circadian clock system
OIIB Summer School 2017, Okazaki, Japan ,2017/8/17
- Genki Kobayashi
Study on Hydride Ion Conductive Oxyhydrides
2017 Hydrogen Metal Systems Gordon Research Conference, Making the Hydrogen Economy Work - New Developments and Recent Applications , Easton , MA , USA , 2017/7/16-21
- Genki Kobayashi
Relationship between anion arrangement and H- conductivity in La-Sr-Li oxyhydride system
21th International Conference on Solid State Ionics, Padua, Italy, 2017/6/18-23
- Genki Kobayashi
Study on H- Conductive Oxyhydrides for Next-Generation Battery Systems
21th International Conference on Solid State Ionics, Padua, Italy, 2017/6/18-23
- Genki Kobayashi
Hydride Ion Conduction Oxyhydrides
8th International Conference on Electroceramics , Nagoya, Japan, 2017/5/28-31
- Akiyama S
Biological X-ray Solution Scattering Activities at the Institute for Molecular Science
Okazaki Conference 2017 on Grand Challenges in Small-angle Scattering, Okazaki, Japan, 2017/3/19
- Akiyama S
Atomic-scale origins of slowness and temperature compensation in KaiC
Circadian Clock of Cyanobacteria during 1991-2017, Nagoya, Japan, 2017/3/12
- Yutaka Shikano
Introduction to discrete-time quantum walk
8th Jagna International Workshop: "Structure, Function, and Dynamics: from nm to Gm"
Research Center for Theoretical Physics (RCTP) , Jagna, Bohol, Philippines, 2017/1/4-7
- Akiyama S
2016
- Akiyama S
Cyanobacterial circadian clock system. How and why can it be so slow and stable?
Sapporo Symposium on Biological Rhythm, Sapporo, Japan, 2016/11/10
- Yutaka Shikano
Discrete-time quantum walk with feed-forward quantum coin
4th Yokohama Workshop on Quantum Walks
Yokohama National University, Minatomirai Campus, 2016/10/20 - Yutaka Shikano
Visualizing Quantum State by Weak Measurement
2nd International Conference on Quantum Foundations
Panache Hotel, Patna, India, 2016/10/18 - Yutaka Shikano
Phononic interference in bulk solid diamond
International Symposium on Ultrafast Intense Laser Science 15 (ISUIL15)
Convention Center of Cassis, France, 2016/10/3 - Genki Kobayashi
Material Design for H- Conductive Oxyhydrides
Solid State Protonic Conductor-18, Oslo, Norway, 2016/9/21
- Yutaka Shikano
Observation of Aharonov-Bohm effect with quantum tunneling
Conference on Concepts and Paradoxes in a Quantum Universe,Perimeter Institute for Theoretical Physics, Canada, 2016/6/20
- Yutaka Shikano
Visualizing Quantum State
EMN Quantum Meeting 2016,Holiday Inn Resort Phuket, Thailand, 2016/4/9
- Hiroshi M. Yamamoto
Organic Field-Effect-Transistor with Superconducting Channel for Electrical, Mechanical and Photochemical Switching
WCSM-2016, Singapore, 2016/3/5
- Akiyama S
X-ray Solution Scattering as Research Tools for Bio-molecular Systems
Winter School of ASIA CORE Program, Beijing, China, 2016/2/26
- Mukaiyama A, Abe J, and Akiyama S
Circadian periodicity encoded in KaiC ATPase
Winter School of ASIA CORE Program, Beijing, China, 2016/2/26
- Hiroshi M. Yamamoto
Molecular superconductor with electric-field, strain, and light
AsiaCore2016, Beijing, China, 2016/2
- Akiyama S
Atomic-scale origins of slowness in the cyanobacterial circadian clock
8th Japan-Korea Seminars on Biomolecular Science: Experiments and Simulation, Okazaki, Japan, 2016/2/16
- Hiroshi M. Yamamoto
Molecular Conductors and Its Application to Field-Effect-Transistors
PACCON2016, Bangkok, Thailand , 2016/2/9-11
- Yutaka Shikano
On Nonlinear Quantum Walk
2016 Joint Mathematics Meetings "AMS Special Session on Quantum Walks, Quantum Markov Chains, Quantum Computation and Related Topics",Washington State Convention Center, Seattle, U.S.A., 2016/1/7
- Akiyama S
2015
- Yutaka Shikano
On Lesson From Material Databases
Pacifichem 2015 symposium on "Machine Learning Meets First-Principles Simulation for Materials Discovery",Honolulu, Hawaii, U.S.A., 2015/12/15-20
- Hiroshi M. Yamamoto
Switching of organic superconductivity by electric-field, strain, and light
Pacifichem2015, Hawaii, U.S.A., 2015/12/15-20
- Hiroshi M. Yamamoto
Sheathed Nanowires Aligned by Crystallographic Periodicity
3CG, Hong Kong, China, 2015/12/14
- Hiroshi M. Yamamoto
Field-/Light-induced Phase Transitions in organic FET interfaces
WPOO3-2015, Okazaki, Japan, 2015/12/10
- Hiroshi M. Yamamoto
Switching of organic superconductivity by electric-field, strain, and light
AIMR seminar, Sendai, Japan, 2015/11/27
- Hiroshi M. Yamamoto
Phase-transition Transistors Based on Organic Materials
Molecular Designs for Advanced Materials: Workshop and
Conference, Chiang Mai, Thailand , 2015/11/24-27 - Hiroshi M. Yamamoto
Photo-Induced Superconductivity Observed at Organic Field-Effect-Transistor Interface
ISS2015, Tokyo, Japan ,2015/11/17
- Yutaka Shikano
Visualizing a quantum state
17th SPVM National Physics Conference,Cavite State University, Philippines, 2015/10/22-24
- Akiyama S
KaiC as Circadian Pacemaker of Cyanobacterial Circadian Clock
Grand Design of Molecular Systems, Okazaki, Japan, 2015/10/8
- Nobuyasu Koga
Design of ideal protein structures
The 15th KIAS Conference on Protein Structure and Function, Korea Institute for Advanced Study (Seoul Korea), 2015/9/18
- Hiroshi M. Yamamoto
Field-, Strain-, and Light-induced Superconductivity in Organic FETs
Seminar in Max Plank Institute Stuttgart, Stuttgart, Germany, 2015/9
- Hiroshi M. Yamamoto
Organic Phase-Transition Transistors with Strongly-Correlated Electrons
ISCOM2015, Munich, Germany, 2015/9/6-11
- Akiyama S
KaiC as Circadian Pacemaker of Cyanobacterial Circadian Clock
European Biological Rhythms Society (EBRS)/World Congress of Chronobiology
(WCC) meeting, Manchester, UK , 2015/8/6 - Hiroshi M. Yamamoto
Thin-Film Single Crystals for Organic Superconducting Transistor
ICCOSS2015, Niigata, Japan, 2015/7/16
- Hiroshi M. Yamamoto
Field-induced superconductivity in an organic FET
EM-NANO2015, Niigata, Japan 2015/6/17
- Yutaka Shikano
Toward Quantum Phononics - As an example of coherent phonon in diamond -
The 3rd Awaji International Workshop on Electron Spin Science & Technology: Biological and Materials Science Oriented Applications (AWEST 2015) Awaji Yumebutai International Conference Center, Japan, 2015/6/14-17
- Genki Kobayashi
Hydride Conduction in oxyhydride
20th International Conference on Solid State Ionics, Keystone, U.S.A. ,2015/6/14-19
- Yutaka Shikano
Introduction to Discrete-Time Quantum Walk
Symposium on Computing Science Mindanao State University, Iligan Institute of Technology (MSU-IIT), Philippines ,2015/5
- Yutaka Shikano
Deformed Statistical Mechanics
Tropical School and Workshop on Analytic and Computational Methods for Complex Systems: The Case of Polymer Conformations Research Center for Theoretical Physics, Central Visayan Institute Foundation, Philippines ,2015/5/11-15
- Yutaka Shikano
Statistical analysis on Complex systems (Lectures)
Tropical School and Workshop on Analytic and Computational Methods for Complex Systems: The Case of Polymer Conformations Research Center for Theoretical Physics, Central Visayan Institute Foundation, Philippines, 2015/5/11-15
- Hiroshi M. Yamamoto
Light-induced superconductivity using photo-active electric double layer
Asian Academic Seminar 2015, Kolkata, India, 2015/3/7
- Hiroshi M. Yamamoto
Organic Field-Effect-Transistors with Light-Tunable Superconducting Channel
PACCON2015, Bangkok, Thailand, 2015/1/21-23
- Yutaka Shikano
2014
- Yutaka Shikano
Discrete-time quantum walk and Quantum dynamical simulation
Tensor Network States: Algorithms and Applications, Institute of Physics, Chinese Academy of Sciences, Beijing, China, 2014/12/5
- Hiroshi M. Yamamoto
Sheathed Nanowires Aligned by Crystallographic Periodicity
3CG, Phuket, Thailand , 2014/11/4-7
- Hiroshi M. Yamamoto
Organic Field-Effect-Transistors with Light-Tunable Superconducting Channel
Malaysian Chemical Congress, Kuala Lumpur, Malaysia, 2014/11
- Nobuyasu Koga
Toward design of molecular motors
Symposium on Rise of Molecular Machines, The 52nd Annual Meeting of the Biophysical Society of Japan, Sapporo Convention Center, 2014/9/27
- Yutaka Shikano
Optomechanics of Quantum Rotor
Quantum Technologies Based On Hybrid Emitter - Solid State Systems,University of Strasbourg, France , 2014/9
- Genki Kobayashi
Hydrode Conduction in Oxyhydrides
Solid State Protonic Conductor-17, Korea Institute of Science Technology, Korea, 2014/9/14-19
- Hiroshi M. Yamamoto
A Possibility of Cross-Bar Wiring in Three-Dimensional Crystallographic Space
SSDM2014, Tsukuba, Japan, 2014/9
- Hiroshi M. Yamamoto
Organic Field-Effect-Transistors with Light-Tunable Superconducting Channel
IMRC2014, Cancun, Mexico ,2014/8
- Nobuyasu Koga
Designing protein molecules for understanding their working principles
Osaka University, 2014/7/11
- Yutaka Shikano
Discrete Time Quantum Walk Is Quantum Dynamical Simulator
2014 edition of the International Conference in Statistical Physics(Sigma Phi 2014),
Sheraton Rhodes Hotel, Greece, 2014/7/10 - Hiroshi M. Yamamoto
Organic Electronics with 'Nano' Crystals
Kasetsart University, Thailand, 2014/7
- Hiroshi M. Yamamoto
Organic Electronics with 'Nano' Crystals
Chulalongkorn University,Thailand, 2014/7
- Hiroshi M. Yamamoto
Organic Electronics with 'Nano' Crystals
Mahidol University,Thailand , 2014/7
- Hiroshi M. Yamamoto
Organic field-effect-transistor with light-tunable superconducting channel
Nanyang Technological University,Singapore, 2014/7
- Hiroshi M. Yamamoto
Organic Field-Effect-Transistor with Flexible Superconducting Channel
NIMS Conference, Tsukuba, Japan, 2014/7/3
- Akiyama S
KaiC as Circadian Pacemaker of Cyanobacterial Circadian Clock
Society for Research on Biological Rhythms, Montana, U.S.A., 2014/6/17
- Akiyama S
Small-angle x-ray Scattering Study on Cyanobacterial Clock Protein KaiC
The 6th Taiwan-Japan Joint Meeting on X-ray and Neutron Scattering,
Taipei, Taiwan, 2014/3/11 - Genki Kobayashi
Solid State Ionics for Next-Generation Electrochemical Devices
Asian CORE Winter School on Frontiers of Molecular, Photo-, and Material Sciences , Taipei, Taiwan, 2014/2/25
- Akiyama S
KaiC as A Circadian Pacemaker of Cyanobacterial Circadian Clock
Asian CORE Winter School on Frontiers of Molecular, Photo-, and Material
Sciences, Taipei, Taiwan ,2014/2/25
- Yutaka Shikano
2013
- Hiroshi M. Yamamoto
Organic Mott-FET and its phase transitions
International Workshop on Interface Science for Novel Physical Properties and Electronics, Okayama, 2013/12/9
- Akiyama S
KaiC as A Circadian Pacemaker of Cyanobacterial Circadian Clock
6th Japan-Korea Seminars on Biomolecular Science, Okazaki, Japan, 2013/11/27
- Yutaka Shikano
Quantum State Tomography with Optical Vortex
Symposium on New Frontiers of Quantum Photonic Network , University of Electro-Communications, Japan, 2013/11/6
- Hiroshi M. Yamamoto
A Strained Organic Field-Effect-Transistor with a Gate-Tunable Superconducting Channel
ISSMM, Tokyo, Japan, 2013/11/4-8
- Yamamoto, H. M.
Organic Mott-FET and Field-Induced Superconductivity
5th International Symposium on Emergence of Highly Elaborated π-Space and Its Function, Okazaki, Japan, 2013/10/24-25
- Hiroshi M. Yamamoto
Organic Mott FET and field induced superconductivity
ICTP LEMSUPER Conference, Trieste, Italy, 2013/9/26
- Yutaka Shikano
On Fluctuation-Dissipation Theorem in Non-equilibrium Steady State
ELiTES thermal noise workshop 2 , Jena University, Germany, 2013/8/28-9/4
- Yutaka Shikano
On the Signal Amplification -From Weak-Value Amplification-
Summer Workshop on "Physics, Mathematics, And All That Quantum Jazz" ,Kinki University, Japan, 2013/8/7-9
- Yutaka Shikano
Toward Inversionless Lasing
Conference on NAIST Green Photonics "Toward Organic Laser" ,Nara Institute of Science and Technology, Japan, 2013/8/2 - Yamamoto, H. M.
Electric field induced superconductivity in strongly correlated organic materials
ISCOM2013, Montreal, Canada , 2013/7/15
- Akiyama S
KaiC as a Circadian Pacemaker of Cyanobacterial Circadian Clock
15th Japan-Korea Symposium on Molecular Science, "Hierarchical Structure from Quantum to Functions of Biological Systems", Sannomiya, Japan, 2013/7/5
- Yutaka Shikano
How to implement the discrete time quantum walk in the hybrid quantum system?
Exploring of quantum walks: approach to a material science: IMI Workshop of the Joint Research Projects , Institute of Mathematics for Industry, Kyushu University,Japan, 2013/6/21
- Yutaka Shikano
Quasi-Magnon Dynamics on Hybrid Superconducting Qubit and Nitrogen Vacancy Centers in Diamond
1st Awaji International Workshop on "Electron Spin Science & Technology: Biological and Materials Science Oriented Applications", Awaji Yumebutai International Conference Center, Japan, 2013/6/17
- Akiyama S
Circadian Pacemaker of Cyanobacteria by Intra-molecular Feedback Regulation of KaiC ATPase
IMS Workshop on "Hierarchical Molecular Dynamics: From Ultrafast Spectroscopy to Single Molecule Measurements", Okazaki, Japan , 2013/5/25
- Akiyama S
Tracking and Visualizing Intramolecular Feedback in Cyanobacterial Clock Protein KaiC
The 5th Japan-Taiwan joint meeting on neutron and X-ray scattering,
Tokai, Japan , 2013/2/26
- Hiroshi M. Yamamoto